12/02/2021 18:45:53 : INFO  : Run start: Fri Feb 12 18:45:53 GMT 2021
12/02/2021 18:45:53 : INFO  : Initialised job
12/02/2021 18:45:53 : INFO  : Initialised job:
Sequence
>Ice2_____
MTSLSKSFMQSGRICAACFYLLFTLLSIPISFKVGGLECGLSFTVTLFTLYFITTTLNVL
ARRHGGRLYIFFTNCLYYSQHFIIASLLYLFLSGFSNDELGNVLKNKYNESESFLEALKN
SLNSNQINYVLYYYYYRFVVQPWQFVLTKSTPFFTLSEGFFTILAIQAVGETNRWLSNDL
NSNTWIISSLLTSGGVITASLYYLYRIYVTPIWPLSIQTASLLGLVLSMVCGLGLYGIVS
QKGSVIESSLFFAYIVRCIYEISPKLATTATDEILNLFKDVWQKHQRNLPTADNLLCYFH
NVILKNAEVLWGSFIPRGRKKTGDFHDKLISILSFEKVSLISKPFWKFFKNFTFSVPLSI
NEFCQVTIKMASESVSPAIVINLCFRVLMFYSATRIIPALQRKNDKQLRKSRRIMKGLYW
YSPCILIAMYTHLILQYSGELKKDLCIWGCSEKWFGVDQPEIIVDSWGFWNWCNIFCTIL
VYATELIGSGS

12/02/2021 18:45:53 : INFO  : Checked sequence
12/02/2021 18:45:53 : INFO  : Finding homologues with PSI-BLAST
12/02/2021 18:45:53 : INFO  : PSI-BLAST 3 iterations
12/02/2021 18:47:52 : INFO  : PSI-BLAST 5 iterations
12/02/2021 18:49:08 : INFO  : Finished PSI-BLAST
12/02/2021 18:49:08 : INFO  : Running Buildali to generate a3m file
12/02/2021 18:51:51 : INFO  : Converting to HMM
12/02/2021 18:51:51 : INFO  : Calibrating HMM
12/02/2021 18:52:04 : INFO  : Searching HMM database
12/02/2021 19:11:24 : INFO  : Finished buildali
12/02/2021 19:11:24 : INFO  : Predicting secondary structure
12/02/2021 19:11:24 : INFO  : Predicted secondary structure (PSI-Pred)
12/02/2021 19:11:24 : INFO  : Predicting Disordered regions
12/02/2021 19:11:24 : INFO  : Predicted Disorder (Disopred)
12/02/2021 19:11:24 : INFO  : Running memsat_svm check
12/02/2021 19:11:24 : INFO  : Exitval for mkdir: 
12/02/2021 19:12:29 : INFO  : Running memsat_svm full
12/02/2021 19:16:09 : INFO  : Predicted Transmembrane (memsat_svm) ID 'a721a0f25048fc30'
12/02/2021 19:16:09 : INFO  : Initialising fold library search
12/02/2021 19:16:10 : INFO  : Initialised search input
12/02/2021 19:16:10 : INFO  : Building Ensemble models (simple)
12/02/2021 19:16:10 : INFO  : Building hh.c6sp2E_.model.1.pdb in buildhhmodels2: 2715
12/02/2021 19:16:11 : INFO  : 2738: Incrementing modnum
12/02/2021 19:16:11 : INFO  : Building hh.c6sp2F_.model.2.pdb in buildhhmodels2: 2875
12/02/2021 19:16:12 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/a721a0f25048fc30/hh.c6sp2F_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/a721a0f25048fc30/c6sp2F_.2.pdb
12/02/2021 19:16:12 : INFO  : 2898: Incrementing modnum
12/02/2021 19:16:12 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:12 : INFO  : Building c6sp2E_.1.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:12 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:12 : INFO  : Building c6sp2F_.2.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:13 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:13 : INFO  : Building c6cfwB_.3.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:14 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:14 : INFO  : Building c7d3uF_.4.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:14 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:15 : INFO  : Building c6ly5l_.5.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:16 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:16 : INFO  : Building c6z16F_.6.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:17 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:17 : INFO  : Building c6u8yb_.7.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:19 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:19 : INFO  : Building c4dhxA_.8.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:19 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:19 : INFO  : Building d1rzhh2.9.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:20 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:20 : INFO  : Building d1l9bh2.10.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:20 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:20 : INFO  : Building c1yodB_.11.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:20 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:20 : INFO  : Building c4nqkD_.12.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:21 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:21 : INFO  : Building c1yodA_.13.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:21 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:21 : INFO  : Building c4dhxD_.14.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:22 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:22 : INFO  : Building c6pnjL_.15.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:24 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:24 : INFO  : Building d2ra7a1.16.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:24 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:24 : INFO  : Building c6t0br_.17.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:26 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:26 : INFO  : Building c6xdcB_.18.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:26 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:26 : INFO  : Building c6xdcA_.19.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:26 : INFO  : 2991: Setting $modnum to $j
12/02/2021 19:16:27 : INFO  : Building d1qvxa_.20.pdb  in buildhhmodels2: 3011
12/02/2021 19:16:31 : INFO  : Number of PDBs built is 20
12/02/2021 19:16:31 : INFO  : Finished HH model building (simple)
12/02/2021 19:16:31 : INFO  : html domain output complete ID 'a721a0f25048fc30'
12/02/2021 19:18:02 : INFO  : Running loop modelling on c6sp2E_.1.pdb
12/02/2021 19:19:35 : INFO  : Running loop modelling on c6sp2F_.2.pdb
12/02/2021 19:19:41 : INFO  : Running loop modelling on c6cfwB_.3.pdb
12/02/2021 19:19:46 : INFO  : Running loop modelling on c7d3uF_.4.pdb
12/02/2021 19:19:47 : INFO  : Running loop modelling on c6ly5l_.5.pdb
12/02/2021 19:19:52 : INFO  : Running loop modelling on c6z16F_.6.pdb
12/02/2021 19:20:01 : INFO  : Running loop modelling on c6u8yb_.7.pdb
12/02/2021 19:20:05 : INFO  : Running loop modelling on c4dhxA_.8.pdb
12/02/2021 19:20:06 : INFO  : Running loop modelling on d1rzhh2.9.pdb
12/02/2021 19:20:07 : INFO  : Running loop modelling on d1l9bh2.10.pdb
12/02/2021 19:20:07 : INFO  : Running loop modelling on c1yodB_.11.pdb
12/02/2021 19:20:30 : INFO  : Running loop modelling on c4nqkD_.12.pdb
12/02/2021 19:20:31 : INFO  : Running loop modelling on c1yodA_.13.pdb
12/02/2021 19:20:36 : INFO  : Running loop modelling on c4dhxD_.14.pdb
12/02/2021 19:20:37 : INFO  : Running loop modelling on c6pnjL_.15.pdb
12/02/2021 19:20:37 : INFO  : Running loop modelling on d2ra7a1.16.pdb
12/02/2021 19:20:37 : INFO  : Running loop modelling on c6t0br_.17.pdb
12/02/2021 19:20:39 : INFO  : Running loop modelling on c6xdcB_.18.pdb
12/02/2021 19:20:39 : INFO  : Running loop modelling on c6xdcA_.19.pdb
12/02/2021 19:20:40 : INFO  : Running loop modelling on d1qvxa_.20.pdb
12/02/2021 19:20:41 : INFO  : hhscores now
12/02/2021 19:20:41 : INFO  : c6sp2E_ being hashed to 1
12/02/2021 19:20:41 : INFO  : c6sp2F_ being hashed to 2
12/02/2021 19:20:41 : INFO  : Skipping hh.c6sp2E_.model.1.pdb
12/02/2021 19:20:41 : INFO  : Skipping hh.c6sp2F_.model.2.pdb
12/02/2021 23:48:47 : WARN  : 98 percent of springs active

12/02/2021 23:48:47 : WARN  : 45 percent of springs active

12/02/2021 23:48:47 : WARN  : 31 percent of springs active

12/02/2021 23:48:47 : WARN  : 23 percent of springs active

12/02/2021 23:48:47 : WARN  : 18 percent of springs active

12/02/2021 23:48:47 : INFO  : Chose Poing model 00004 as best Jury score
12/02/2021 23:48:47 : INFO  : PoingMM finished ID 'a721a0f25048fc30'
12/02/2021 23:48:47 : INFO  : Running Pulchra
12/02/2021 23:50:01 : WARN  : Poing had less coil than modeller, copying modeller model to modeller.coil.pdb
12/02/2021 23:50:01 : INFO  : Adding sidechains to model(s)
12/02/2021 23:50:02 : INFO  : Run end  : Fri Feb 12 23:50:02 GMT 2021
